Physicians in private practice face a unique tax situation. You're running a business with significant overhead, managing complex compensation structures, and earning income at a level that triggers California's top marginal rate — all while trying to actually practice medicine. The result is that tax planning often falls through the cracks, or gets delegated to a generalist accountant who doesn't understand the nuances of medical practice finance.
That's an expensive gap. The five strategies below are not exotic or aggressive — they're well-established tools that physicians at your income level should be using. If your current CPA hasn't discussed all of them with you, it's worth asking why.
Context: These strategies assume you're operating as an independent physician in private practice — either as a sole owner or as part of a physician-owned group. Employed physicians have fewer levers to pull, though some strategies still apply.
Structure Your Entity to Minimize Self-Employment Taxes
Most physicians in private practice operate as sole proprietors or through a simple LLC — and most of them are paying more in self-employment tax than they need to. The reason is that all net income from a sole proprietorship or single-member LLC is subject to self-employment tax (15.3% on the first ~$168,000, then 2.9% on earnings above that), on top of federal and California income taxes.
An S-Corporation changes that equation. When you operate through an S-Corp, you pay yourself a "reasonable salary" — and only that salary is subject to payroll taxes. The remaining profits flow through as a distribution, which is not subject to self-employment tax. For a physician earning $500,000 of net practice income, this structure can generate $15,000–$30,000 or more in annual payroll tax savings.
There are real costs and administrative requirements involved — payroll, quarterly filings, state fees — but for most physicians above $200,000 in net income, the S-Corp structure pays for itself many times over. A Professional Corporation (PC) is the required entity type for licensed professionals in California, which can elect S-Corp tax treatment.
Maximize Retirement Contributions Through a Defined Benefit Plan
A standard Solo 401(k) allows you to contribute up to $69,000 in 2025 (employee + employer contributions combined, with a $7,500 catch-up if you're 50 or older). That's excellent — and most physicians should have a 401(k) in place. But if you're in your peak earning years and want to accelerate tax-deferred wealth accumulation, a Defined Benefit (DB) plan can allow contributions of $150,000 to $350,000+ per year, depending on your age and compensation.
DB plans are actuarially determined — the contribution is based on funding a specific retirement income amount. Older physicians benefit more because the funding period is shorter. Combined with a 401(k), a DB plan can create an enormous annual deduction for physicians in the 50s who still have significant earning years ahead.
The tradeoffs: DB plans have minimum contribution requirements each year, actuarial fees, and administration costs. They work best for physicians who have consistent high income and plan to maintain the plan for at least a few years. But for the right physician, there's no better tool for reducing current tax while building retirement assets.
Take Advantage of the Section 199A Qualified Business Income Deduction
The Tax Cuts and Jobs Act created the Section 199A deduction, which allows owners of pass-through businesses to deduct up to 20% of their qualified business income (QBI). For physicians, this is complicated — medicine is a "specified service trade or business" (SSTB), which means the deduction phases out at higher income levels.
The phaseout begins at $191,950 (single) or $383,900 (married filing jointly) of taxable income in 2024. If your income is above the complete phaseout threshold, you get no 199A deduction. But if you're within the phaseout range, careful planning around retirement contributions, deductions, and compensation can preserve a meaningful portion of the deduction.
The 199A deduction is set to expire after 2025 unless Congress acts to extend it — but as of this writing, the rules are still in effect. This is one more reason to have a CPA model your tax situation annually rather than relying on last year's return.
Implement a Backdoor Roth IRA Strategy
Most physicians earn too much to contribute directly to a Roth IRA (the 2024 income limit phases out at $161,000 for single filers and $240,000 for married filers). But the backdoor Roth IRA is a legal workaround that has survived IRS scrutiny for years.
The strategy: make a non-deductible contribution to a traditional IRA (anyone can do this regardless of income), then convert that IRA to a Roth IRA. The conversion is taxable — but if you have no other pre-tax IRA balances, the tax hit is minimal. Once the funds are in the Roth, they grow and are withdrawn tax-free in retirement.
For married physicians, you and your spouse can each do a backdoor Roth, contributing $14,000–$16,000 per year in after-tax dollars that will never be taxed again. Over a 20-year career, the compounding effect is substantial. Be aware of the pro-rata rule — if you have existing pre-tax IRA balances, the math becomes more complicated.
Optimize Your Compensation Mix and Time Income Strategically
Physicians operating through a PC or S-Corp have flexibility in how they receive income that W-2 employees simply don't have. With careful planning, you can:
- Balance salary vs. distributions to minimize payroll taxes while maintaining a "reasonable compensation" level the IRS will accept
- Time income across tax years by delaying December billing collections or accelerating deductible expenses into high-income years
- Establish an accountable plan to reimburse yourself tax-free for legitimate business expenses — medical journals, CME, home office, professional development
- Hire family members in legitimate roles to shift income to lower tax brackets (subject to reasonable compensation and actual work performed requirements)
- Utilize a Health Reimbursement Arrangement (HRA) to pay for medical expenses and premiums tax-free through your practice
None of these are aggressive or risky when done correctly. But they all require intentional setup — they don't happen automatically.
The Compounding Effect of All Five
These strategies don't just work in isolation. A physician who operates through a properly structured Professional Corporation, maxes out a Defined Benefit plan and 401(k), executes backdoor Roth contributions annually, and actively manages their compensation mix can realistically reduce their effective tax rate by 8–12 percentage points compared to a physician who does none of these things. At a $600,000 income level, that's $48,000–$72,000 per year staying in your pocket instead of going to the IRS and FTB.
Why Most Physicians Underutilize These Strategies
The honest answer is that most general accountants don't specialize in physician finances. They know the tax code, but they don't think proactively about your specific situation — the interplay between your practice structure, your compensation, your retirement savings, and your personal financial goals. By the time you get your tax return in April, the opportunities from the prior year are mostly gone.
At Aberny CPA, we work with physicians across Southern California year-round — not just at tax time — to ensure these strategies are implemented before the window closes. If you're a physician in private practice who hasn't had a dedicated review of your tax structure, let's schedule a conversation.
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